protein

General Target Information
BXGT Id	BXGT010562
Protein Name	ATP-dependent RNA helicase DOB1
Uniport Id	P47047
Gene	MTR4
Gene Id	853397
Domain	DEAD; DSHCT; Helicase_C; rRNA_proc-arch
Pfam	PF00270 PF08148 PF00271 PF13234
Organism	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Target protein affiliated biological pathways

KEGG

Class	Subclass	KEGG Id	Pathway Name

Gene Ontology

GO Type	GO Id	Gene Ontology
Biological Process	GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Biological Process	GO:0000460	maturation of 5.8S rRNA
Biological Process	GO:0006397	mRNA processing
Biological Process	GO:0043629	ncRNA polyadenylation
Biological Process	GO:0071031	nuclear mRNA surveillance of mRNA 3'-end processing
Biological Process	GO:0071042	nuclear polyadenylation-dependent mRNA catabolic process
Biological Process	GO:0071035	nuclear polyadenylation-dependent rRNA catabolic process
Biological Process	GO:0071038	nuclear polyadenylation-dependent tRNA catabolic process
Biological Process	GO:0071049	nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription
Biological Process	GO:0071051	polyadenylation-dependent snoRNA 3'-end processing
Biological Process	GO:0006401	RNA catabolic process
Biological Process	GO:0000292	RNA fragment catabolic process
Biological Process	GO:0016075	rRNA catabolic process
Biological Process	GO:0034475	U4 snRNA 3'-end processing
Biological Process	GO:0034476	U5 snRNA 3'-end processing
molecular function	GO:0034458	3'-5' RNA helicase activity
molecular function	GO:0005524	ATP binding
molecular function	GO:0003729	mRNA binding
molecular function	GO:0016491	oxidoreductase activity
molecular function	GO:0008143	poly(A) binding
molecular function	GO:0003724	RNA helicase activity
cellular component	GO:0005730	nucleolus
cellular component	GO:0005634	nucleus
cellular component	GO:0031499	TRAMP complex

Reactome

Pathway Id	Pathway Name

Target protein-related diseases

Disease

CUI Id	BXGD Id	Disease Name	Disease Class

Target protein-related compounds

Compounds

The target protein-related foods

Foods

BXGF Id	Food Name	Scientific Name	Food Group	Number of compound^{? Number of compound in food, higher numbers indicate the food are more associated with the protein}