Showing entry for U6 snRNA-associated Sm-like protein LSm6


　 　 　 　 　 　 　 　 　 　 　 　
General Target Information
BXGT IdBXGT011419
Protein NameU6 snRNA-associated Sm-like protein LSm6
Uniport IdP62312
GeneLSM6
Gene Id11157
DomainLSM
Pfam PF01423  
OrganismHomo sapiens (Human)
Target protein  affiliated  biological  pathways
KEGG
Class Subclass KEGG Id Pathway Name
2. Genetic Information Processing 2.3 Folding, sorting and degradation hsa03018 RNA degradation
2. Genetic Information Processing 2.1 Transcription hsa03040 Spliceosome
Gene Ontology
GO Type GO Id Gene Ontology
Biological Process GO:0043928 exonucleolytic catabolism of deadenylated mRNA
Biological Process GO:0030490 maturation of SSU-rRNA
Biological Process GO:0006402 mRNA catabolic process
Biological Process GO:0000398 mRNA splicing, via spliceosome
Biological Process GO:0008380 RNA splicing
Biological Process GO:0008033 tRNA processing
molecular function GO:0046982 protein heterodimerization activity
molecular function GO:0003723 RNA binding
cellular component GO:0005737 cytoplasm
cellular component GO:0005829 cytosol
cellular component GO:0120115 Lsm2-8 complex
cellular component GO:0005730 nucleolus
cellular component GO:0005654 nucleoplasm
cellular component GO:0005634 nucleus
cellular component GO:0000932 P-body
cellular component GO:0030532 small nuclear ribonucleoprotein complex
cellular component GO:0005732 small nucleolar ribonucleoprotein complex
cellular component GO:0071005 U2-type precatalytic spliceosome
cellular component GO:0046540 U4/U6 x U5 tri-snRNP complex
cellular component GO:0005688 U6 snRNP
Reactome
Pathway Id Pathway Name
R-HSA-429914 Deadenylation-dependent mRNA decay
R-HSA-429914 Deadenylation-dependent mRNA decay
R-HSA-430039 mRNA decay by 5' to 3' exoribonuclease
R-HSA-430039 mRNA decay by 5' to 3' exoribonuclease
R-HSA-72163 mRNA Splicing - Major Pathway
R-HSA-72172 mRNA Splicing
R-HSA-72203 Processing of Capped Intron-Containing Pre-mRNA
R-HSA-8953854 Metabolism of RNA
R-HSA-8953854 Metabolism of RNA
Target protein-related  diseases
Disease
CUI Id BXGD Id Disease Name Disease Class
Target protein-related  compounds
Compounds
BXGC Id Compound Name Strcuture Molecular Weight
BXGC0003418 Undylic acid 324.18
BXGC0006198 Citric acid 192.12
BXGC0044087 Uridine 244.07
The  target protein-related  foods
Foods
BXGF Id Food Name Scientific Name Food Group Number of compound? Number of compound in food, higher numbers indicate the food are more associated with the protein