protein

Showing entry for Small nuclear ribonucleoprotein Sm D3

General Target Information
BXGT Id	BXGT011422
Protein Name	Small nuclear ribonucleoprotein Sm D3
Uniport Id	P62318
Gene	SNRPD3
Gene Id	6634
Domain	LSM
Pfam	PF01423
Organism	Homo sapiens (Human)

Target protein affiliated biological pathways

KEGG

Class	Subclass	KEGG Id	Pathway Name
2. Genetic Information Processing	2.1 Transcription	hsa03040	Spliceosome
6. Human Diseases	6.3 Immune diseases	hsa05322	Systemic lupus erythematosus

Gene Ontology

GO Type	GO Id	Gene Ontology
Biological Process	GO:0008334	histone mRNA metabolic process
Biological Process	GO:0051170	import into nucleus
Biological Process	GO:0000398	mRNA splicing, via spliceosome
Biological Process	GO:0006479	protein methylation
Biological Process	GO:0008380	RNA splicing
Biological Process	GO:0000387	spliceosomal snRNP assembly
Biological Process	GO:0006369	termination of RNA polymerase II transcription
molecular function	GO:0019899	enzyme binding
molecular function	GO:0071208	histone pre-mRNA DCP binding
molecular function	GO:0003723	RNA binding
molecular function	GO:0070034	telomerase RNA binding
molecular function	GO:0071209	U7 snRNA binding
cellular component	GO:0071013	catalytic step 2 spliceosome
cellular component	GO:0000243	commitment complex
cellular component	GO:0005829	cytosol
cellular component	GO:0034709	methylosome
cellular component	GO:0016604	nuclear body
cellular component	GO:0005654	nucleoplasm
cellular component	GO:0005634	nucleus
cellular component	GO:0034715	pICln-Sm protein complex
cellular component	GO:0071011	precatalytic spliceosome
cellular component	GO:0030532	small nuclear ribonucleoprotein complex
cellular component	GO:0034719	SMN-Sm protein complex
cellular component	GO:0005681	spliceosomal complex
cellular component	GO:0097526	spliceosomal tri-snRNP complex
cellular component	GO:0005697	telomerase holoenzyme complex
cellular component	GO:0005689	U12-type spliceosomal complex
cellular component	GO:0005685	U1 snRNP
cellular component	GO:0005686	U2 snRNP
cellular component	GO:0071007	U2-type catalytic step 2 spliceosome
cellular component	GO:0071005	U2-type precatalytic spliceosome
cellular component	GO:0046540	U4/U6 x U5 tri-snRNP complex
cellular component	GO:0005687	U4 snRNP
cellular component	GO:0005682	U5 snRNP
cellular component	GO:0005683	U7 snRNP

Reactome

Pathway Id	Pathway Name
R-HSA-111367	SLBP independent Processing of Histone Pre-mRNAs
R-HSA-191859	snRNP Assembly
R-HSA-194441	Metabolism of non-coding RNA
R-HSA-72163	mRNA Splicing - Major Pathway
R-HSA-72165	mRNA Splicing - Minor Pathway
R-HSA-72172	mRNA Splicing
R-HSA-72203	Processing of Capped Intron-Containing Pre-mRNA
R-HSA-73856	RNA Polymerase II Transcription Termination
R-HSA-73857	RNA Polymerase II Transcription
R-HSA-74160	Gene expression (Transcription)
R-HSA-75067	Processing of Capped Intronless Pre-mRNA
R-HSA-77588	SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs
R-HSA-8953854	Metabolism of RNA

Target protein-related diseases

Disease

CUI Id	BXGD Id	Disease Name	Disease Class
C0007097	BXGD000424	Carcinoma	Neoplasms
C0007131	BXGD000441	Non-Small Cell Lung Carcinoma	Neoplasms; Respiratory Tract Diseases
C0019693	BXGD001346	HIV Infections	Infections; Immune System Diseases
C0024667	BXGD001794	Animal Mammary Neoplasms	Neoplasms; Animal Diseases
C0024668	BXGD001795	Mammary Neoplasms, Experimental	Neoplasms
C0205696	BXGD004107	Anaplastic carcinoma	Neoplasms
C0205697	BXGD004108	Carcinoma, Spindle-Cell	Neoplasms
C0205698	BXGD004109	Undifferentiated carcinoma	Neoplasms
C0205699	BXGD004110	Carcinomatosis	Neoplasms
C0242379	BXGD005157	Malignant neoplasm of lung	Neoplasms; Respiratory Tract Diseases
C0684249	BXGD009790	Carcinoma of lung	Neoplasms; Respiratory Tract Diseases
C1257925	BXGD011814	Mammary Carcinoma, Animal	Neoplasms; Animal Diseases
C1306460	BXGD012362	Primary malignant neoplasm of lung	Neoplasms; Respiratory Tract Diseases
C4505456	BXGD022964	HIV Coinfection	Infections; Immune System Diseases

Target protein-related compounds

Compounds

BXGC Id	Compound Name	Strcuture	Molecular Weight
BXGC0000436	Glycerol		92.09
BXGC0006198	Citric acid		192.12

The target protein-related foods

Foods

BXGF Id	Food Name	Scientific Name	Food Group	Number of compound^{? Number of compound in food, higher numbers indicate the food are more associated with the protein}