Showing entry for Exosome complex component RRP42


　 　 　 　 　 　 　 　 　 　 　 　
General Target Information
BXGT IdBXGT013236
Protein NameExosome complex component RRP42
Uniport IdQ12277
GeneRRP42
Gene Id851447
DomainRNase_PH; RNase_PH_C
Pfam PF01138   PF03725  
OrganismSaccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
Target protein  affiliated  biological  pathways
KEGG
Class Subclass KEGG Id Pathway Name
Gene Ontology
GO Type GO Id Gene Ontology
Biological Process GO:0043928 exonucleolytic catabolism of deadenylated mRNA
Biological Process GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Biological Process GO:0043628 ncRNA 3'-end processing
Biological Process GO:0070651 nonfunctional rRNA decay
Biological Process GO:0071028 nuclear mRNA surveillance
Biological Process GO:0071042 nuclear polyadenylation-dependent mRNA catabolic process
Biological Process GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process
Biological Process GO:0071038 nuclear polyadenylation-dependent tRNA catabolic process
Biological Process GO:0070478 nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay
Biological Process GO:0034427 nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
Biological Process GO:0070481 nuclear-transcribed mRNA catabolic process, non-stop decay
Biological Process GO:0071051 polyadenylation-dependent snoRNA 3'-end processing
Biological Process GO:0016075 rRNA catabolic process
Biological Process GO:0034473 U1 snRNA 3'-end processing
Biological Process GO:0034475 U4 snRNA 3'-end processing
Biological Process GO:0034476 U5 snRNA 3'-end processing
molecular function GO:0017091 AU-rich element binding
cellular component GO:0000177 cytoplasmic exosome (RNase complex)
cellular component GO:0000176 nuclear exosome (RNase complex)
cellular component GO:0005730 nucleolus
Reactome
Pathway Id Pathway Name
Target protein-related  diseases
Disease
CUI Id BXGD Id Disease Name Disease Class
Target protein-related  compounds
Compounds
BXGC Id Compound Name Strcuture Molecular Weight
BXGC0002588 Magnesium 24.31
BXGC0037687 (4S)-2-methylpentane-2,4-diol 118.1
The  target protein-related  foods
Foods
BXGF Id Food Name Scientific Name Food Group Number of compound? Number of compound in food, higher numbers indicate the food are more associated with the protein