acompound

Showing entry for Geranyl diphosphate

　　　　　　　　　　　　　　　

General Compound Information
BXGC Id	BXGC0000954
Compound Name	Geranyl diphosphate
Structure
Formula	C10H20O7P2
InchiKey	GVVPGTZRZFNKDS-JXMROGBWSA-N
SMILES	CC(C)=CCC\C(C)=C\CO[P@@](=O)(O)OP(=O)(O)O
Inchi	InChI=1S/C10H20O7P2/c1-9(2)5-4-6-10(3)7-8-16-19(14,15)17-18(11,12)13/h5,7H,4,6,8H2,1-3H3,(H,14,15)(H2,11,12,13)/b10-7+
IUPAC	[({[(2E)-3,7-dimethylocta-2,6-dien-1-yl]oxy}(hydroxy)phosphoryl)oxy]phosphonic acid
Molecular Weight	314.21
Pubchem Id	445995
Chembl Id	CHEMBL41342

Targets of Information Source

DrugBank

Uniport Id	BXGT Id	Protein Name	Status	Protein Class	Gene	Groups	Target Type
Uniport Id	BXGT Id	Protein Name	Status	Protein Class	Gene	Groups	Target Type
P62619	BXGT011444	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	reviewed	-	ispF	experimental	-
Q9PM68	BXGT021338	Bifunctional enzyme IspD/IspF	reviewed	-	ispDF	experimental	-
P62617	BXGT011443	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	reviewed	-	ispF	experimental	-
P14324	BXGT008005	Farnesyl pyrophosphate synthase	reviewed	Enzyme	FDPS	experimental	-
Q4R2T2	BXGT014885	Prenyltransferase	unreviewed	-	-	experimental	-
O95749	BXGT005394	Geranylgeranyl pyrophosphate synthase	reviewed	-	GGPS1	experimental	-
P9WFF5	BXGT012240	(2Z,6E)-farnesyl diphosphate synthase	reviewed	-	Rv1086	experimental	-
P9WFF7	BXGT012242	Decaprenyl diphosphate synthase	reviewed	-	uppS	experimental	-

PDB

Uniport Id	BXGT Id	Protein Name	Status	Protein Class	Gene	Ki nM	ic50 nM	Kd nM	Ka M-1
Uniport Id	BXGT Id	Protein Name	Status	Protein Class	Gene	Ki nM	ic50 nM	Kd nM	Ka M-1
P62617	BXGT011443	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	reviewed	ispF	-	-	-	-	-
P08836	BXGT006828	Farnesyl pyrophosphate synthase	reviewed	FDPS	-	-	-	-	-
Q9PM68	BXGT021338	Bifunctional enzyme IspD/IspF	reviewed	ispDF	-	-	-	-	-
Q4R2T2	BXGT014885	Prenyltransferase	unreviewed		-	-	-	-	-
Q12051	BXGT013224	Geranylgeranyl pyrophosphate synthase	reviewed	BTS1	-	-	-	-	-
P9WFF5	BXGT012240	(2Z,6E)-farnesyl diphosphate synthase	reviewed	Rv1086	-	-	-	-	-
P9WFF7	BXGT012242	Decaprenyl diphosphate synthase	reviewed	uppS	-	-	-	-	-
Q9SBR3	BXGT021576	Geranyl diphosphate synthase large subunit	unreviewed		-	-	-	-	-
Q9F1Y5	BXGT020336	Geranyl diphosphate 2-C-methyltransferase	reviewed	SCO7701	-	-	-	-	-
Q9HWY4	BXGT020637	Geranyltranstransferase	unreviewed	ispA	-	-	-	-	-
D3KYU3	BXGT002892	Geranyl diphosphate 2-C-methyltransferase	reviewed	gdpmt	-	-	-	-	-
O28625	BXGT004316	Bacteriochlorophyll synthase, 33 kDa subunit	unreviewed	AF_1648	-	-	-	3200	-
A0A010	BXGT000001	MoeN5	unreviewed	moeN5	-	-	-	-	-
Q9CA40	BXGT020227	Nudix hydrolase 1	reviewed	NUDT1	-	-	-	-	-
M4T4U9	BXGT003862	Undecaprenyl diphosphate synthase	unreviewed	mcl22	-	-	-	-	-
A0A1J1JDI6	BXGT025217	Putative prenyl transferase	unreviewed	pagF	-	-	-	-	-
M4I1C6	BXGT026008	Geranyl diphosphate phosphohydrolase	reviewed	NUDIX1	-	-	-	-	-

Binding DB

n.a

Uniport Id	BXGT Id	Protein Name	Status	Protein Class	Gene	Ki nM	ic50 nM	Kd nM	EC50 nM
Uniport Id	BXGT Id	Protein Name	Status	Protein Class	Gene	Ki nM	ic50 nM	Kd nM	EC50 nM

CHEMBL

Uniport Id	BXGT Id	Protein Name	Status	Protein Class	Gene	width="10%">Type	Relation	value	Units
Uniport Id	BXGT Id	Protein Name	Status	Protein Class	Gene	Type	Relation	value	Units
P14324	BXGT008005	Farnesyl pyrophosphate synthase	reviewed	Enzyme	FDPS	Km	'='	4400	nM
P14324	BXGT008005	Farnesyl pyrophosphate synthase	reviewed	Enzyme	FDPS	Km	'='	8400	nM
P29704	BXGT009373	Squalene synthase	reviewed	-	ERG9	Inhibition	-	-	-

Foods containing the compound

Foods

BXGF Id	Food Name	Scientific Name	Food Group
BXGF Id	Food Name	Scientific Name	Food Group
BXGF00165	Common sage	Salvia officinalis	Herbs and Spices

The compound-realted diseases

Diseases

BXGD Id	Disease Name	CUI Disease Id	Disease Class Name	Number of targets^{?Number of targets related to compound connecting disease, higher numbers indicate the compound is more associated with the disease}