protein

Showing entry for Exosome complex exonuclease RRP6

General Target Information
BXGT Id	BXGT013230
Protein Name	Exosome complex exonuclease RRP6
Uniport Id	Q12149
Gene	RRP6
Gene Id	854162
Domain	DNA_pol_A_exo1; HRDC; PMC2NT
Pfam	PF01612 PF00570 PF08066
Organism	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Target protein affiliated biological pathways

KEGG

Class	Subclass	KEGG Id	Pathway Name

Gene Ontology

GO Type	GO Id	Gene Ontology
Biological Process	GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Biological Process	GO:0071044	histone mRNA catabolic process
Biological Process	GO:0071028	nuclear mRNA surveillance
Biological Process	GO:0071040	nuclear polyadenylation-dependent antisense transcript catabolic process
Biological Process	GO:0071039	nuclear polyadenylation-dependent CUT catabolic process
Biological Process	GO:0071042	nuclear polyadenylation-dependent mRNA catabolic process
Biological Process	GO:0071035	nuclear polyadenylation-dependent rRNA catabolic process
Biological Process	GO:0071036	nuclear polyadenylation-dependent snoRNA catabolic process
Biological Process	GO:0071037	nuclear polyadenylation-dependent snRNA catabolic process
Biological Process	GO:0071038	nuclear polyadenylation-dependent tRNA catabolic process
Biological Process	GO:0071033	nuclear retention of pre-mRNA at the site of transcription
Biological Process	GO:0071049	nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription
Biological Process	GO:0071048	nuclear retention of unspliced pre-mRNA at the site of transcription
Biological Process	GO:0071051	polyadenylation-dependent snoRNA 3'-end processing
Biological Process	GO:0000973	posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
Biological Process	GO:0034473	U1 snRNA 3'-end processing
Biological Process	GO:0034475	U4 snRNA 3'-end processing
Biological Process	GO:0034476	U5 snRNA 3'-end processing
molecular function	GO:0000175	3'-5'-exoribonuclease activity
molecular function	GO:0000166	nucleotide binding
molecular function	GO:0042134	rRNA primary transcript binding
molecular function	GO:0003727	single-stranded RNA binding
cellular component	GO:0000176	nuclear exosome (RNase complex)
cellular component	GO:0005730	nucleolus
cellular component	GO:0005634	nucleus

Reactome

Pathway Id	Pathway Name

Target protein-related diseases

Disease

CUI Id	BXGD Id	Disease Name	Disease Class

Target protein-related compounds

Compounds

BXGC Id	Compound Name	Strcuture	Molecular Weight
BXGC0002588	Magnesium		24.31
BXGC0003418	Undylic acid		324.18
BXGC0024261	Adenosine Phosphate		347.06

The target protein-related foods

Foods

BXGF Id	Food Name	Scientific Name	Food Group	Number of compound^{? Number of compound in food, higher numbers indicate the food are more associated with the protein}